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Image Search Results
Journal: bioRxiv
Article Title: Interplay between PML NBs and HIRA for H3.3 deposition on transcriptionally active interferon-stimulated genes
doi: 10.1101/2021.11.30.470516
Figure Lengend Snippet: A. (left) Fluorescence microscopy visualization of HIRA (green) and PML (red) in BJ cells treated with a control siRNA targeting luciferase (siLuc) or with an siRNA against DAXX (siDAXX) for 48h. Ruxolitinib (Ruxo) was added at 2μM in the last 24h. Cell nuclei are visualized by DAPI staining (grey). Scale bars represent 10μm. (right) Histogram shows quantitative analysis of cells with HIRA localization at PML NBs. p-values (Student t-test): *<0,05; ns: non significant. Numbers represent the mean of 3 independent experiments (±SD). B. Histogram shows quantitative analysis of PML protein levels from western blot analysis presented in Sup. Figure 3C. p-values (Student t-test): ns: non significant. Numbers represent the mean of 3 independent experiments (±SD). C. (left) Fluorescence microscopy visualization of HIRA (green) and H3.3-HA (red) in BJ eH3.3i cells treated with doxycyclin (Dox) and IFNβ for 24h. Arrowheads indicate nuclei with high levels of nucleoplasmic H3.3-HA preventing HIRA accumulation in PML NBs despite IFNβ treatment. Scale bars represent 10μm. (right) Histogram shows quantitative analysis of cells with HIRA localization at PML NBs in BJ eH3.3i treated with Dox and IFNβ as indicated for 24h. p-values (Student t-test): *<0,05; **<0,01; ns: non significant. Numbers represent the mean of 3 independent experiments (±SD). D. Fluorescence microscopy visualization of HIRA (green) and H3.3-HA (red) in BJ eH3.3i cells treated with doxycyclin and with or without IFNβ for 24h. High exposure indicates a lane where H3.3-HA signal was specifically increased in order to show H3.3-HA localization in PML NBs without saturating the signal in cells with higher expression. Scale bars represent 10μm. E. Quantification of nuclear H3.3-HA intensity levels in BJ eH3.3i cells treated as in C. Mean H3.3-HA intensity levels were calculated on a pool of n=121 nuclei from 3 independent experiments (total). Nuclei were then separated on basis of accumulation of HIRA in PML NBs (nuclei with HIRA in PML NBs, n=58) or without it (nuclei with no HIRA in PML NBs, n=63) and mean H3.3-HA intensity was plotted for each category. Bars represent median with interquartile range. p-values (Mann-Whitney u-test): ****<0,0001. F. Fluorescence microscopy visualization of HIRA (green) and H3.3-HA (red) in IMR90 eH3.3i cells treated as in C. Scale bars represent 10μm. Arrows indicate nuclei showing accumulation of HIRA in PML NBs together with H3.3-HA, while arrowheads indicate nuclei with high levels of nucleoplasmic H3.3-HA preventing HIRA accumulation in PML NBs despite IFNβ treatment.
Article Snippet: Human BJ primary foreskin fibroblasts (ATCC, CRL-2522),
Techniques: Fluorescence, Microscopy, Control, Luciferase, Staining, Western Blot, Expressing, MANN-WHITNEY